The Marine Science Station has initiated scientific and educational collaboration links with various institutions, universities and organizations. Such as:
- Aqaba Special Economic Zone Authority, ASEZA (Aqaba, Jordan).
- Center for Tropical Marine Ecology, ZMT (Bremen, Germany).
- USAID-Middle East Regional Cooperation (MERC) Program (USA).
- North Atlantic Treaty Organization (NATO)-Science for Peace and Security (SPS).
- Regional Organization for the Conservation of the Environment of the Red Sea and Gulf of Aden, PERSGA (Jeddah, KSA).
- Japan International Cooperation Agency , JICA (Amman Office).
- Senckenberg museum (Frankfort, Germany).
- Stanford University (Stanford, USA).
- University of Technology and Science (Irbid, Jordan).
- UNESCO (Amman Office).